Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886378.1_cds_XP_016440503.1_35957
CDS Infomation

[gene=LOC107766265] [db_xref=GeneID:107766265] [protein=protein SHI RELATED SEQUENCE 1-like] [protein_id=XP_016440503.1] [location=complement(join(130058..130508,133193..133559,134530..134874,135438..135759))] [gbkey=CDS]
Sequence

ATGGCTAATTTCTTTTCACTAGACGGAAGAGGAAGTAGCAGCCAAGATCAACAGCAAGAA
ATTAGCAGCAGTCACCACCGTATCAATAACCGGCCAGTACCCACGGAAATCAGCTCAGAG
AGTTGGTTCTTGTACAGAAATGATCATAATCAAGAAATGCCCACTTACAAAGGCTTCGAG
TTATGGCAAAATACAACTCCTCAGCATCAACCTGAACAACAACAACAGTTTCGTCACCCA
GTTTATCCTTTGCAAGATCTTTATTCCACTGCTGTTGGATTAGGTGTTGGGCCCAGCCAA
AGTGGCTTTGACATATTTGGAGGCGATCAAGAGGCATCAAGATCAGGGTTTGTGATGATG
AGGAGTGGAGGAGCTGGAATTAGCTGCCAAGATTGTGGGAACCAAGCTAAGAAAGATTGT
CAACACATGAGATGTAGGACTTGCTGCAAGAGTAGAGGGTTTCAGTGCCAAACTCATGTC
AAAAGCACTTGGGTTCCAGCCGCTAAACGTAGAGAAAGGCAACAACAACTTTCTGCTCTA
CAGCAGCAGCAAAAGGAACGACATGATCAGTTACACTTAGATCATAATAATAATAAACCT
GAAAGGCAAAGAGAGGATCCAAGTGCTTCCTCTCTTGTTTGTACTCGTTTACCTTCAAAT
ACTAGTGGGTTAGAAGTGGGAAAATTTCCAGCAAAAGTAAGTTCAGCTGCGGTATTTCAG
TGCATCCAAATGAGCTCAATTGAGGACGCTGAGGATCAGTTAGCATATCAGGCCGCTGTG
AATATTGGGGGCCACGTGTTCAAAGGAATTCTATGTGATCAAGGTCCTGAAAGTGAGTAT
AATAATAATATGGCTGCAGCCGGTGATACTTCTTCTGGTGGTGGAAGTGGTAGCGCTGGA
GTTCAACACCACCATAACTCCGCTGCCACCGCCATCATCGCAAGCGGCGGTGCTGCAGCG
GCAGCGGAAGCCTCAAATTTTCTTGACCCTTCTTTATTTCCAGCTCCCCTTAGTACTTTC
ATGTCAGCTGGTACAATATTCAATTTAATGTTTCTTCTTCCTCGTACTATTATGTCTTCT
TCAAACCCTAACCCTCGGAGATTCCCCATTATTGACAACCTATCTCTTGCTCCTATTAGA
AGTAGGAGAAGAGGAATGCTTCGTAGTTTAGGGTCTTCTTCATCACGAGTTCCCTCTGTT
CCTTCATCGAGTTCTACTCCTCCATCTAGAACCAGAGGTTCTCTTTCTCAAAGGTCTTCA
TCAAGAGGTAAAGAACCCACTGAACCTCTTCGTGAACCTTTAGTGGATGAAATTGTTCCT
GCGGAACTATCTTTCTATAATGATAGAGAATCCCTTAAAAATCAACTATCTTCATTAGTT
GAGGCTTGTGTTGTGGTATCCTTAACTGGATTCTGTAACTGCTATTTTTCTTCCTTTCTC
ATATTTGAATCTGCTACGGAGTTGATGTTCCTGGATGTCTGTTGA

Peptide Sequence

PEP ID

XP_016440503.1
PEP Infomation

PREDICTED: protein SHI RELATED SEQUENCE 1-like [Nicotiana tabacum]
Sequence

MANFFSLDGRGSSSQDQQQEISSSHHRINNRPVPTEISSESWFLYRNDHNQEMPTYKGFE
LWQNTTPQHQPEQQQQFRHPVYPLQDLYSTAVGLGVGPSQSGFDIFGGDQEASRSGFVMM
RSGGAGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLSAL
QQQQKERHDQLHLDHNNNKPERQREDPSASSLVCTRLPSNTSGLEVGKFPAKVSSAAVFQ
CIQMSSIEDAEDQLAYQAAVNIGGHVFKGILCDQGPESEYNNNMAAAGDTSSGGGSGSAG
VQHHHNSAATAIIASGGAAAAAEASNFLDPSLFPAPLSTFMSAGTIFNLMFLLPRTIMSS
SNPNPRRFPIIDNLSLAPIRSRRRGMLRSLGSSSSRVPSVPSSSSTPPSRTRGSLSQRSS
SRGKEPTEPLREPLVDEIVPAELSFYNDRESLKNQLSSLVEACVVVSLTGFCNCYFSSFL
IFESATELMFLDVC

Transcript Sequence

Gene sequence data has not been registered.